ibllib.tests.integration.tasks.test_dynamic_pipeline

Classes

TestDynamicPipeline
TestDynamicPipelineWithAlyx
TestExperimentDescription
TestStandardPipelines

class TestDynamicPipeline(*args, **kwargs)

Bases: IntegrationTest

required_files = ['dynamic_pipeline/ephys_NP3B']

An optional list of required files/folders to glob for, relative to data_path.

setUp() → None

Hook method for setting up the test fixture before exercising it.

test_alyx_task_dicts()

test_alyx_task_creation_pipeline()

test_alyx_task_creation_task_dict()

compare_dicts(dict1, dict2, id=True)

tearDown() → None

Hook method for deconstructing the test fixture after testing it.

class TestStandardPipelines(*args, **kwargs)

Bases: IntegrationTest

setUp() → None

Hook method for setting up the test fixture before exercising it.

test_ephys_3B()

test_ephys_3A()

test_ephys_NP24()

test_training()

test_habituation()

test_widefield()

test_photometry()

test_mesoscope()

Test that the mesoscope pipeline is created when the mesoscope device is present.

test_chained()

Test pipeline creation when there are multiple task protocols run within a session

test_extractors()

Test pipeline creation when the tesk extractors are defined within the experiment.description file.

check_pipeline()

compare_dicts(dict1, dict2)

class TestDynamicPipelineWithAlyx(*args, **kwargs)

Bases: IntegrationTest

setUp() → None

Hook method for setting up the test fixture before exercising it.

test_run_dynamic_pipeline_full()

This runs the full suite of tasks on a TrainingChoiceWorld task.

tearDown() → None

Hook method for deconstructing the test fixture after testing it.

class TestExperimentDescription(*args, **kwargs)

Bases: IntegrationTest

setUp() → None

Hook method for setting up the test fixture before exercising it.

test_params_reading()

test_compatibility()

Test for ibllib.io.session_params._patch_file.

This checks whether a description file is old and modified the dict to be compatible with the most recent spec.